BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011A12LP1|AL426146
(795 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1090 1505 0.0
>3x_Contig1090
Length = 6094
Score = 1505 bits (758), Expect = 0.0
Identities = 790/798 (98%), Gaps = 3/798 (0%)
Strand = Plus / Minus
Query: 1 ccgaaaaatactgtggaaaaaaaaatgaaatgcgagattaaargaactgtaactatagcc 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 3227 ccgaaaaatactgtggaaaaaaaaatgaaatgcgagattaggggaactgtaactatagcc 3168
Query: 61 acacggtgatttcggattggaacagcttacacaaattacgaag-aatagtttcaagttgt 119
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 3167 acacggtgatttcggattggaacagcttacacaaattacgaagtaatagtttcaagttgt 3108
Query: 120 agccaagggtgctaattcaacagcgaaattggacatgatatgttagcacatagttctttc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3107 agccaagggtgctaattcaacagcgaaattggacatgatatgttagcacatagttctttc 3048
Query: 180 tcttactgaatgacaatatacgtgtacatatatatatgtagcaatatataaatgtgtgta 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3047 tcttactgaatgacaatatacgtgtacatatatatatgtagcaatatataaatgtgtgta 2988
Query: 240 ttcttaaggtgaataattcacttgtatatacagaaaaggtacaggcgacattaccgagga 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2987 ttcttaaggtgaataattcacttgtatatacagaaaaggtacaggcgacattaccgagga 2928
Query: 300 gtcacaaagaagcaagtgtgttatatttgttgttgaaacaagaatattttttattcagaa 359
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 2927 gtcacaaagaagcaagtgtgtaatatttgttgttgaaacaagaatattttttattcagaa 2868
Query: 360 atgttgaactctgaatgtagaataatattgcgatgttatatgctgttgttgaaatgcaga 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2867 atgttgaactctgaatgtagaataatattgcgatgttatatgctgttgttgaaatgcaga 2808
Query: 420 aaaaatcataaaccataaacccgaacaagtgtggtgaattaattaatattaaccatgttg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2807 aaaaatcataaaccataaacccgaacaagtgtggtgaattaattaatattaaccatgttg 2748
Query: 480 aaatgcaaagagtgtgttgttaaaccaaccaaaagttgaagaaaaaaaaaataaagaggt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2747 aaatgcaaagagtgtgttgttaaaccaaccaaaagttgaagaaaaaaaaaataaagaggt 2688
Query: 540 ggggataagctggcaatttactagtacaactgctgtagaagatcgtagattgtgtcgttc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2687 ggggataagctggcaatttactagtacaactgctgtagaagatcgtagattgtgtcgttc 2628
Query: 600 gttgaaatgaaatcgttatcaacaacgttgatcaamacgtaattgtcgatgatgtgattg 659
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 2627 gttgaaatgaaatcgttatcaacaacgttgatcaaaacgtaattgtcgatgatgtgattg 2568
Query: 660 accaagtttaccgattctgttgccttatgtt-cacgaaggtcaatttccattctttcaag 718
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 2567 accaagtttaccgattctgttgccttatgttccacgaaggtcaatttccattctttcaag 2508
Query: 719 atagtgaagaactcttccttccatgctaggaaggacgctttttccacaatagttggttgt 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2507 atagtgaagaactcttccttccatgctaggaaggacgctttttccacaatagttggttgt 2448
Query: 779 aaaa-ttcacttccaggg 795
|||| |||||||||||||
Sbjct: 2447 aaaatttcacttccaggg 2430
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,090
Number of Sequences: 1807
Number of extensions: 10090
Number of successful extensions: 96
Number of sequences better than 1.0e-20: 1
length of query: 795
length of database: 10,358,551
effective HSP length: 16
effective length of query: 779
effective length of database: 10,329,639
effective search space: 8046788781
effective search space used: 8046788781
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)